Gblocks is a computer program written in ANSI C language that eliminates poorly aligned positions and divergent regions of an alignment of DNA or protein sequences. These positions may not be homologous or may have been saturated by multiple substitutions and it is convenient to elimina...
The Gibbs Motif Sampler will allow you to identify motifs, conserved regions, in DNA or protein sequences.
The Gibbs Motif Sampler will allow you to identify motifs, conserved regions, in DNA or protein sequences.
go-perl is a collection of perl modules for working with ontologies and data, in particular the Gene Ontology and other Open Bio-Ontologies.
go-perl is a collection of perl modules for working with ontologies and data, in particular the Gene Ontology and other Open Bio-Ontologies.
Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks.
Graph visualization is a way of representing structural information as diagrams of abstract graphs and networks.
grappe is a pattern matching program. It looks, in a text, for a set of patterns containing don't care symbols (wildcards) of unbounded or bounded length. The size of patterns, as well as their length, is unlimited.
grappe is a pattern matching program. It looks, in a text, for a set o...
Concert Technology allows the user to describe a model that is quite similar to the natural mathematical programming description.ILOG Concert Technology provides a set of lightweight C++, Java and .NET objects for representing optimization problems. It is included as part of ILOG CPLEX,...
InterProScan is a tool that combines different protein signature recognition methods into one resource.
InterProScan is a tool that combines different protein signature recognition methods into one resource.
K2R reads a KAKSI XML output (.kxo) and outputs a lot of different informations in raw formats (mainly FASTA format), see k2r -h
K2R reads a KAKSI XML output (.kxo) and outputs a lot of different informations in raw formats (mainly FASTA format), see k2r -h
"KAKSI takes a PDB file as input (or a PDB code if you have a mirror of the PDB on your computer) and prints an XML output with a lot of informations from the PDB file and the secondary structure assignment."
"KAKSI takes a PDB file as input (or a PDB code if you have a mirror of the P...
The Kepler Project is dedicated to furthering and supporting the capabilities, use, and awareness of the free and open source, scientific workflow application, Kepler. Kepler is designed to help scientists, analysts, and computer programmers create, execute, and share models and analys...
Script perl permettant la récupération de données en provenance de BioMart.
Script perl permettant la récupération de données en provenance de BioMart.
The MEME Suite allows you to: * discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences, * search sequence databases using motifs, * compare a motif to all motifs in a database of motifs, and * associate motifs with Gene Ontology terms via their putative target...