Multiple alignment program
MAFFT is a multiple sequence alignment program for unix-like operating systems
MAFFT is a multiple sequence alignment program for unix-like operating systems
Genome annotation pipeline with command-line and web interfaces. This uses, or may use, other software including apollo, augustus, exonerate, gbrowse and snap that are not all documented elsewhere on this page at present.
MAKER is a portable and easily configurable genome annotation pi...
Protein structure modelling program
PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS
PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS
Program to calculate atomic solvent accessible areas of proteins
Naccess program calculates the atomic accessible surface defined by rolling a probe of given size around a van der Waals surface.
Naccess program calculates the atomic accessible surface defined by rolling a probe of giv...
Program to score the words of a sequence against an alignment matrix
Scan a DNA sequence with a posiion-specific scoring matrix (PSSM)
Scan a DNA sequence with a posiion-specific scoring matrix (PSSM)